In the interest of limiting required memory, the pred assumes you are using the Prolog interface of bio_db (see bio_db_interface/2), this predicate abolishes the interrogated bio_db data predicates once it has counted its contents.
Opts
pack(mtx),
use true to save as csv to bio_db_stats.csv, version for depositing
a bio_db_repo installed versioned csv in bio_db_scirpts/ directory,
or give atom of file name to use
As of bio_db_version(3:6:0,_) the directory scripts/bio_db_stats/ holds the csv output of this script for each
new pack(bio_db_repo) version, produced with option csv(
?- bio_db_stats.
% bio_db version: 3:4:0, date: date(2021,5,10)
% bio_db_repo version: 21:12:3, date: date(2021,12,3)
%
% edge_gont_is_a/2 has 70755 records.
% edge_gont_negatively_regulates/2 has 3089 records.
% edge_gont_part_of/2 has 8126 records.
% edge_gont_positively_regulates/2 has 3062 records.
% edge_gont_regulates/2 has 3552 records.
% edge_strg_hs/3 has 11938498 records.
% edge_strg_hs_symb/3 has 5085802 records.
% edge_strg_mouse/3 has 14496358 records.
% edge_strg_mouse_symb/3 has 4099916 records.
% map_ense_ensg_chrl/5 has 60664 records.
% map_ense_ensg_hgnc/2 has 40047 records.
% map_ense_ensg_symb/2 has 40047 records.
% map_ense_enst_chrl/5 has 236816 records.
% map_ense_enst_ensg/2 has 236816 records.
% map_ense_mouse_ensg_chrl/5 has 55416 records.
% map_ense_mouse_ensg_mgim/2 has 52377 records.
% map_ense_mouse_ensg_symb/2 has 55416 records.
% map_ense_mouse_enst_chrl/5 has 142338 records.
% map_ense_mouse_enst_ensg/2 has 142338 records.
% map_gont_gont_gonm/2 has 43791 records.
% map_gont_gont_symb/3 has 328427 records.
% map_gont_mouse_gont_symb/3 has 419947 records.
% map_gont_mouse_mgim_gont/3 has 419963 records.
% map_gont_symb_gont/3 has 328427 records.
% map_hgnc_ccds_hgnc/2 has 18927 records.
% map_hgnc_ensg_hgnc/2 has 39997 records.
% map_hgnc_entz_hgnc/2 has 42861 records.
% map_hgnc_entz_symb/2 has 42861 records.
% map_hgnc_hgnc_ccds/2 has 18927 records.
% map_hgnc_hgnc_chrb/2 has 42909 records.
% map_hgnc_hgnc_ensg/2 has 39997 records.
% map_hgnc_hgnc_entz/2 has 42861 records.
% map_hgnc_hgnc_name/2 has 42910 records.
% map_hgnc_hgnc_symb/2 has 42910 records.
% map_hgnc_prev_symb/2 has 15257 records.
% map_hgnc_symb_entz/2 has 42861 records.
% map_hgnc_symb_hgnc/2 has 42910 records.
% map_hgnc_syno_symb/2 has 42537 records.
% map_mgim_mouse_mgim_chrl/5 has 305940 records.
% map_mgim_mouse_mgim_entz/2 has 347266 records.
% map_mgim_mouse_mgim_genb/2 has 277165 records.
% map_mgim_mouse_mgim_symb/2 has 305940 records.
% map_mgim_mouse_mgim_unip/2 has 16921 records.
% map_mgim_mouse_symb_wdra/2 has 57106 records.
% map_mgim_mouse_syno_mgim/2 has 252980 records.
% map_ncbi_dnuc_symb/2 has 319353 records.
% map_ncbi_ensg_entz/2 has 35158 records.
% map_ncbi_ensp_entz/2 has 44697 records.
% map_ncbi_entz_ensg/2 has 35158 records.
% map_ncbi_entz_ensp/2 has 44697 records.
% map_ncbi_mouse_syno_symb/2 has 77610 records.
% map_ncbi_rnuc_symb/2 has 379411 records.
% map_pros_pros_prsn/2 has 1828 records.
% map_pros_pros_sprt/7 has 54369 records.
% map_unip_ensp_unip/2 has 115206 records.
% map_unip_hgnc_unip/2 has 78237 records.
% map_unip_mouse_ensp_unip/2 has 67082 records.
% map_unip_mouse_gyno_unip/2 has 26771 records.
% map_unip_mouse_mgim_unip/2 has 80470 records.
% map_unip_mouse_trem_nucs/2 has 129597 records.
% map_unip_mouse_unip_entz/2 has 32793 records.
% map_unip_mouse_unip_symb/2 has 83203 records.
% map_unip_sprt_seqn/2 has 20375 records.
% map_unip_trem_nucs/2 has 1023960 records.
% map_unip_trem_seqn/2 has 183336 records.
% map_unip_unip_entz/2 has 33249 records.
% map_unip_unip_hgnc/2 has 78237 records.
% Total number of predicates: 67, and records: 43338828
% You should better halt this session as bio_db predicates were retracted.
true.
?- bio_db_stats( [abolish(false),csv('/tmp/bio_db_stats.csv')] ).
% bio_db version: 3:4:0, date: date(2021,5,10)
% bio_db_repo version: 21:12:3, date: date(2021,12,3)
%
% edge_gont_is_a/2 has 70755 records.
....
?- shell('head -2 /tmp/bio_db_stats.csv').
edge_gont_is_a,2,70755
edge_gont_negatively_regulates,2,3089
...