% sets libs and download aliases :- ensure_loaded(pack(bio_db/src/bio_db_build_aliases)). % /1 % local libs :- lib(maps_reac/1). std_mouse_maps_reac_defaults( Defs ) :- Defs = [ org(mouse) ]. /** std_mouse_maps_reac( Args ). Spercialisation of reactome maps for mouse. == ?- std_mouse_maps_reac([]). ορέστης;build_repo/mouse% date ; pupsh std_mouse_maps_reac.pl ; date Tue 27 Dec 16:21:05 GMT 2022 % Building at: '/home/nicos/.local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27' % Url: 'https://reactome.org/download/current/NCBI2Reactome_PE_All_Levels.txt' ... % Starting enumeration of list: files % 1./home/nicos/.local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27/dnloads/reac/maps/reac_musm_ncbi_reac.pl % 2./home/nicos/.local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27/dnloads/reac/maps/reac_musm_ncbi_reap.pl % 3./home/nicos/.local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27/dnloads/reac/maps/reac_musm_reac_reap.pl % 4./home/nicos/.local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27/dnloads/reac/maps/reac_musm_reac_recn.pl % 5./home/nicos/.local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27/dnloads/reac/maps/reac_musm_reac_recl.pl % 6./home/nicos/.local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27/dnloads/reac/maps/reac_musm_reap_repn.pl % Ended enumeration of list: files % Finished: std_maps_reac Tue 27 Dec 16:22:12 GMT 2022 ορέστης;reac/maps% date Tue 27 Dec 16:22:35 GMT 2022 ορέστης;reac/maps% pwd /usr/local/users/nicos/local/share/swi-prolog/pack/Downloads/bio_db_repo-22.12.27/dnloads/reac/maps ορέστης;reac/maps% wc -l *_m* 16762 reac_musm_ncbi_reac.pl 79839 reac_musm_ncbi_reap.pl 116139 reac_musm_reac_reap.pl 15871 reac_musm_reac_recl.pl 15871 reac_musm_reac_recn.pl 1721 reac_musm_reap_repn.pl 246203 total == @author nicos angelopoulos @version 0:1 2022/12/24 @see std_maps_reac/1 */ std_mouse_maps_reac( Args ) :- Self = std_mouse_maps_reac, options_append( Self, Args, Opts ), maps_reac( Opts ).